Code-first, setting database collation

I solved the issue by creating the DB myself. The base class is then creating the tables into the empty DB:

    public class MyInitializer : CreateDatabaseIfNotExists<MasterDataModel>
    {
        public override void InitializeDatabase(MasterDataModel context)
        {
            if(!context.Database.Exists())
            {
                using (SqlConnection connection = new SqlConnection("YourConnectionString"))
                {
                    connection.Open();
                    using(SqlCommand command = new SqlCommand(string.Format("CREATE DATABASE {0} COLLATE Latin1_General_CI_AS", "NameOfDatabase"), connection))
                    {
                        command.ExecuteNonQuery();
                    }
                }

                SqlConnection.ClearAllPools();
             }

             base.InitializeDatabase(context);
        }
    }